This pipeline is designed to streamline the process of calculating Tajima's D from a VCF file using a BED file to specify target regions. The pipeline leverages GATK for variant selection and VCFkit ...

A module to parse Variant Call Format (VCF) into JSON. An optional parameter allows to map the genomic coordinates to the protein coordinates using the UniProt Coordinates API. runVEP: a boolean used ...

These Q&As cover recent questions about an SDR allocation. For additional background and basic facts please refer to the SDR factsheet. A direct benefit of a general SDR allocation, and indeed the ...